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Seminar “Beyond linear models in GWAS new tools”

23 Maggio 2024, ore 10:30 – 12:00
Seminar room, Abacus Building (U14)

Department of Informatics, Systems and Communication

Speaker:

Prof. Iuliana Ionita-Laza

Department of Biostatistics, Columbia University, New USA
and  Department of Statistics, Lund University, Sweden

Abstract:
Many complex traits such as schizophrenia, Body Mass Index and various cancers have a substantial heritable component as evidenced by the large number of genetic risk variants discovered by genome-wide association studies (GWAS). Despite these successes, a substantial gap remains between our current understanding and the ability to translate this knowledge into targeted treatment strategies.

A major limitation to the conventional GWAS approaches is the reliance on oversimplified statistical models that fail to capture the complexity underlying genotype-phenotype associations. For example, many human diseases are age-related, and many genetic associations are also age dependent. Such underlying complexity induces heterogeneity in genetic associations and linear regression models in GWAS are not well suited to decipher such heterogeneous associations.

In this talk I will discuss alternative methods based on quantile regression for GWAS and polygenic risk score (PRS) prediction, and will show applications to diverse traits in the UK biobank.

Contact person for this Seminar: marco.antoniotti [at] unimib.it

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2024 Milan Meeting on Next Generation Sequencing (MMNGS)

April 17, 2024, 9:30

University of Milan-Bicocca,
Aula Martini, Edificio Agorà, U6 – 4, underground floor
Piazza dell’Ateneo Nuovo 1, 20126 Milan

The 2024 Milan Meeting on Next Generation Sequencing (MMNGS 2024) is an informal, day-long forum to discuss experiences, research lines and projects regarding the generation and analysis of Next Generation Sequencing data, both from the wet- and the dry-lab perspectives.
The current instantiation will mainly focus (being not limited) on the advancements of Data Science and Artificial Intelligence in Cancer Genomics.

The meeting full program, including the speakers and the titles of the talks, will be published soon.

Confirmed Speakers

In alphabetical order.

  • Francesca Buffa, Università Bocconi
  • Giulia Capitoli, Dept. of Medicine, Università degli Studi di Milano-Bicocca
  • Silvia Cascianelli, Politecnico di Milano
  • Davide Cittaro, Center for Omics Sciences, IRCCS Ospedale San Raffaele
  • Chiara Damiani, BTBS, Università degli Studi di Milano-Bicocca
  • Stefano De Pretis, Center for Omics Sciences, IRCCS Ospedale San Raffaele
  • Maddalena Fratelli, Istituto Mario Negri
  • Alex Graudenzi, DCB, DISCo, Università degli Studi di Milano-Bicocca
  • Mattia Pelizzola, BTBS, Università degli Studi di Milano-Bicocca
  • Martin Schaefer, Istituto Europeo di Oncologia
  • Letizia Straniero, Università Humanitas
  • Zhan Yinxiu, Istituto Europeo di Oncologia
Organizers
  • Marco Antoniotti (co-chair), DISCo, UNIMIB.
  • Gianluca Ascolani. DISCo, UNIMIB.
  • Salvatore D’Antona, DISCo, UNIMIB.
  • Chiara Damiani, BtBs, UNIMIB.
  • Federico Di Marco, DISCo, UNIMIB and IRCCS Ospedale San Raffaele.
  • Alex Graudenzi (co-chair), DISCo, UNIMIB.
  • Francesco Lapi, BtBs, UNIMIB.

Registration and Coffee!!!

Participation is FREE as well as coffee. Participants will just be asked to provide contact information.
Please fill the form to announce your participation.

We are collecting your email for legitimate purposes and it will not be redistributed without your consent.

For info please contact: marco.antoniotti@unimib.it and alex.graudenzi@unimib.it

PROGRAM